Solyc01g006970.3.1 (Solyc01g006970.3)

Aliases : Solyc01g006970.3

Description : 28.1 DNA.synthesis/chromatin structure RNA helicase family protein

Gene families : OG_01_0000624 (Gene family) Phylogenetic Tree(s): OG0000624_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc01g006970.3.1
Cluster	HCCA cluster: Cluster_285

Target	Alias	Description	ECC score	Gene Family Method
AT1G58060	No alias	RNA helicase family protein	0.06	Gene family
AT2G01130	No alias	DEA(D/H)-box RNA helicase family protein	0.04	Gene family
Cpa\|evm.model.tig00000786.1	No alias	28.99 DNA.unspecified DEA(D/H)-box RNA helicase family protein	0.01	Gene family
Cre03.g171650	No alias	28.1 DNA.synthesis/chromatin structure RNA helicase...	0.01	Gene family
Cre06.g266416	No alias	28.1 DNA.synthesis/chromatin structure RNA helicase...	0.01	Gene family
GSVIVT01011809001	No alias	28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA...	0.06	Gene family
GSVIVT01023271001	No alias	28.1 DNA.synthesis/chromatin structure RNA helicase...	0.03	Gene family
LOC_Os01g02884	Os01g0118100	28.99 DNA.unspecified DEA(D/H)-box RNA helicase family protein	0.03	Gene family
LOC_Os03g53760	Os03g0748800	28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA...	0.02	Gene family
LOC_Os10g33275	Os10g0471350	28.1 DNA.synthesis/chromatin structure RNA helicase...	0.03	Gene family
MA_10437209g0010	No alias	28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA...	0.03	Gene family
Zm00001d032735	GRMZM2G399212	28.1 DNA.synthesis/chromatin structure RNA helicase...	0.08	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	InterProScan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011709	DUF1605	785	865
IPR011545	DEAD/DEAH_box_helicase_dom	174	330
IPR001650	Helicase_C	437	562
IPR007502	Helicase-assoc_dom	626	713

External Links

No external refs found!