Solyc01g006710.3.1 (Solyc01g006710.3)


Aliases : Solyc01g006710.3

Description : 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0000624 (Gene family) Phylogenetic Tree(s): OG0000624_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g006710.3.1
Cluster HCCA cluster: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
AT1G58060 No alias RNA helicase family protein 0.06 Gene family
AT2G01130 No alias DEA(D/H)-box RNA helicase family protein 0.05 Gene family
AT5G04895 No alias DEA(D/H)-box RNA helicase family protein 0.03 Gene family
Cpa|evm.model.tig00000786.1 No alias 28.99 DNA.unspecified DEA(D/H)-box RNA helicase family protein 0.01 Gene family
Cre03.g171650 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.01 Gene family
GSVIVT01011809001 No alias 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.02 Gene family
GSVIVT01022608001 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.03 Gene family
GSVIVT01023271001 No alias 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.05 Gene family
LOC_Os01g02884 Os01g0118100 28.99 DNA.unspecified DEA(D/H)-box RNA helicase family protein 0.02 Gene family
LOC_Os03g53760 Os03g0748800 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.02 Gene family
LOC_Os10g33275 Os10g0471350 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.03 Gene family
MA_10437209g0010 No alias 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.02 Gene family
Smo177444 PACid_15404071 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.02 Gene family
Zm00001d032735 GRMZM2G399212 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.11 Gene family

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011709 DUF1605 876 956
IPR014720 dsRBD_dom 1056 1118
IPR001650 Helicase_C 526 656
IPR011545 DEAD/DEAH_box_helicase_dom 266 419
IPR007502 Helicase-assoc_dom 720 808
No external refs found!