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  5. Aspi01Gene04216.t1

Aspi01Gene04216.t1 (Aspi01Gene04216)


Aliases : Aspi01Gene04216

Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0008306 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008306_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene04216.t1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00252440 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.07 OrthoFinder output from all 47 species
AT3G27640 No alias Transducin/WD40 repeat-like superfamily protein 0.05 OrthoFinder output from all 47 species
Als_g15287 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Azfi_s0076.g037840 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
Ceric.16G026900.1 Ceric.16G026900 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cre01.g036100 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g01530 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.08 OrthoFinder output from all 47 species
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.07 OrthoFinder output from all 47 species
Gb_09523 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os03g49200.1 LOC_Os03g49200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g14540 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_10429760g0020 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp8g16590.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.08 OrthoFinder output from all 47 species
Solyc02g086470.3.1 Solyc02g086470 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e012236_P003 Zm00001e012236 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 313 349
IPR001680 WD40_repeat 214 250
IPR001680 WD40_repeat 108 138
IPR001680 WD40_repeat 276 304
IPR001680 WD40_repeat 360 394
IPR001680 WD40_repeat 145 181
No external refs found!