Aspi01Gene04186.t1 (Aspi01Gene04186)


Aliases : Aspi01Gene04186

Description : RNA editing factor *(PDM2) & original description: none


Gene families : OG0007769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007769_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene04186.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g083413 No alias RNA editing factor *(PDM2) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17655 No alias RNA editing factor *(PDM2) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13080 No alias RNA editing factor *(PDM2) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08999 No alias RNA editing factor *(PDM2) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10589 No alias RNA editing factor *(PDM2) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 379 405
IPR002885 Pentatricopeptide_repeat 411 439
IPR002885 Pentatricopeptide_repeat 446 470
IPR002885 Pentatricopeptide_repeat 538 595
IPR002885 Pentatricopeptide_repeat 291 349
IPR002885 Pentatricopeptide_repeat 479 527
IPR002885 Pentatricopeptide_repeat 232 280
No external refs found!