Aspi01Gene04139.t1 (TIR1, Aspi01Gene04139)

Aliases : TIR1, Aspi01Gene04139

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: none

Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene04139.t1
Cluster	HCCA: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method
Als_g01173	COI1	component *(COI) of jasmonic acid receptor complex &...	0.04	OrthoFinder output from all 47 species
Gb_04106	COI1	component COI of jasmonic acid receptor complex	0.03	OrthoFinder output from all 47 species
Lfl_g04782	AFB3	substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)...	0.03	OrthoFinder output from all 47 species
Nbi_g04343	AFB2	substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)...	0.04	OrthoFinder output from all 47 species
Sam_g05124	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g24051	No alias	substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)...	0.04	OrthoFinder output from all 47 species
Sam_g28215	No alias	substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)...	0.03	OrthoFinder output from all 47 species
Spa_g11454	COI1	component *(COI) of jasmonic acid receptor complex &...	0.02	OrthoFinder output from all 47 species
Zm00001e027505_P001	TIR1, Zm00001e027505	component TIR1/AFB of auxin receptor complex. component...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041101	Transp_inhibit	68	114
IPR041567	COI1_F-box	10	48

External Links

No external refs found!