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  5. Aspi01Gene04019.t1

Aspi01Gene04019.t1 (ATL43, Aspi01Gene04019)


Aliases : ATL43, Aspi01Gene04019

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0002999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002999_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene04019.t1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT5G05810 ATL43 RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01029257001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Pir_g42516 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g30629 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ppi_g30667 ATL43 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc05g018310.1.1 Solyc05g018310 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 138 181
No external refs found!