Aspi01Gene03097.t1 (COBL1, Aspi01Gene03097)

Aliases : COBL1, Aspi01Gene03097

Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: none

Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene03097.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00083860	COB,...	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.05	OrthoFinder output from all 47 species
AMTR_s00047p00216570	IRX6, COBL4,...	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
AMTR_s00066p00182490	COBL10,...	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
AT5G15630	IRX6, COBL4	COBRA-like extracellular glycosyl-phosphatidyl...	0.05	OrthoFinder output from all 47 species
AT5G49270	COBL9, MRH4, SHV2, DER9	COBRA-like extracellular glycosyl-phosphatidyl...	0.03	OrthoFinder output from all 47 species
AT5G60920	COB	COBRA-like extracellular glycosyl-phosphatidyl...	0.04	OrthoFinder output from all 47 species
Adi_g021949	SEB1, COBL7, ATSEB1	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Aev_g17419	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Ala_g14783	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Als_g00864	No alias	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Aob_g19185	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Aspi01Gene04685.t1	COBL1, Aspi01Gene04685	regulatory protein *(COB) of cellulose-hemicellulose...	0.07	OrthoFinder output from all 47 species
Aspi01Gene35118.t1	COBL2, Aspi01Gene35118	regulatory protein *(COB) of cellulose-hemicellulose...	0.05	OrthoFinder output from all 47 species
Ceric.16G001100.1	COB, Ceric.16G001100	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Ceric.33G061400.1	COB, Ceric.33G061400	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Dcu_g40673	COBL2	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
GSVIVT01008129001	IRX6, COBL4	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
GSVIVT01012641001	COBL10	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
GSVIVT01036565001	IRX6, COBL4	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.03	OrthoFinder output from all 47 species
Gb_36719	IRX6, COBL4	COB cellulose microfibrils and hemicellulose interaction protein	0.04	OrthoFinder output from all 47 species
LOC_Os03g30250.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.05	OrthoFinder output from all 47 species
LOC_Os03g54750.1	COB, LOC_Os03g54750	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
LOC_Os05g32110.1	COB, LOC_Os05g32110	COB cellulose microfibrils and hemicellulose interaction protein	0.04	OrthoFinder output from all 47 species
LOC_Os07g41320.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.04	OrthoFinder output from all 47 species
Lfl_g38435	COBL2	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
MA_124486g0010	COBL2	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
MA_4056g0010	COB	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
MA_40967g0020	COB	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Mp1g18890.1	COBL10	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
Nbi_g04364	SEB1, COBL7, ATSEB1	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Ore_g28352	COBL2	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Ore_g28453	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Pnu_g20839	COB	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003619	IRX6, COBL4	not classified & original description: CDS=2365-3129	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021681	IRX6, COBL4	regulatory protein *(COB) of cellulose-hemicellulose...	0.06	OrthoFinder output from all 47 species
Smo271954	COBL1	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.04	OrthoFinder output from all 47 species
Solyc02g065765.1.1	COB, Solyc02g065765	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Solyc02g089130.4.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Solyc03g070440.4.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.04	OrthoFinder output from all 47 species
Solyc03g114900.3.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.04	OrthoFinder output from all 47 species
Solyc03g114910.4.1	COB, Solyc03g114910	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Solyc07g064200.4.1	COBL10, Solyc07g064200	COB cellulose microfibrils and hemicellulose interaction protein	0.04	OrthoFinder output from all 47 species
Solyc10g006450.3.1	COBL10, Solyc10g006450	COB cellulose microfibrils and hemicellulose interaction protein	0.04	OrthoFinder output from all 47 species
Spa_g13676	COBL1	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Spa_g24271	COBL1	regulatory protein *(COB) of cellulose-hemicellulose...	0.04	OrthoFinder output from all 47 species
Zm00001e012022_P001	COB, Zm00001e012022	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
Zm00001e035133_P001	COBL10, Zm00001e035133	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Zm00001e035505_P001	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Zm00001e038043_P001	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030198	extracellular matrix organization	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	51	214

External Links

No external refs found!

Aspi01Gene03097.t1 (COBL1, Aspi01Gene03097)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation