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  5. Aspi01Gene03052.t1

Aspi01Gene03052.t1 (OPCL1, Aspi01Gene03052)


Aliases : OPCL1, Aspi01Gene03052

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene03052.t1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT1G20500 No alias AMP-dependent synthetase and ligase family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01010358001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_19726 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_135674g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_199593g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g07170.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Smo177466 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g111170.3.1 Solyc03g111170 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 50 458
No external refs found!