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  5. Aspi01Gene02691.t1

Aspi01Gene02691.t1 (PDF2, Aspi01Gene02691)


Aliases : PDF2, Aspi01Gene02691

Description : HD-ZIP IV-type transcription factor & original description: none


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene02691.t1

Target Alias Description ECC score Gene Family Method Actions
AT4G00730 ANL2, AHDP Homeobox-leucine zipper family protein / lipid-binding... 0.01 OrthoFinder output from all 47 species
Ala_g13002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09754 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g014154 ATML1 HD-ZIP IV-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049156 PDF2 HD-ZIP IV-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g06455 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07707 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030605001 HDG2 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
LOC_Os10g42490.1 HDG5, HB-7,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Lfl_g14381 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433688g0010 ATML1 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
Nbi_g13790 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013927 PDF2 HD-ZIP IV-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sam_g12326 No alias HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 305 527
IPR001356 Homeobox_dom 114 169
No external refs found!