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  5. Solyc00g247300.3.1

Solyc00g247300.3.1 (Solyc00g247300.3)


Aliases : Solyc00g247300.3

Description : 16.2.1.8 secondary metabolism.phenylpropanoids.lignin biosynthesis.F5H encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis. ferulic acid 5-hydroxylase 1 (FAH1)


Gene families : OG_01_0000016 (Gene family) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc00g247300.3.1
Cluster HCCA cluster: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT2G02580 CYP71B9 cytochrome P450, family 71, subfamily B, polypeptide 9 0.04 Gene family
AT2G24180 CYP71B6 cytochrome p450 71b6 0.02 Gene family
AT2G30770 CYP71A13 cytochrome P450, family 71, subfamily A, polypeptide 13 0.03 Gene family
AT3G25180 CYP82G1 cytochrome P450, family 82, subfamily G, polypeptide 1 0.02 Gene family
AT4G13310 CYP71A20 cytochrome P450, family 71, subfamily A, polypeptide 20 0.02 Gene family
AT5G06900 CYP93D1 cytochrome P450, family 93, subfamily D, polypeptide 1 0.02 Gene family
GSVIVT01009607001 No alias 26.10 misc.cytochrome P450 member of CYP82C "cytochrome... 0.04 Gene family
GSVIVT01022205001 No alias 16.2.1.8 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
MA_10101473g0010 No alias 26.10 misc.cytochrome P450 putative cytochrome P450... 0.02 Gene family
MA_109033g0010 No alias 16.8.3.3 secondary... 0.02 Gene family
MA_166142g0010 No alias 16.8.3.3 secondary... 0.02 Gene family
Smo22371 PACid_15411986 16.8.3.3 secondary... 0.02 Gene family
Smo77761 PACid_15420930 16.8.3.3 secondary... 0.02 Gene family
Solyc03g111990.3.1 Solyc03g111990.3 26.10 misc.cytochrome P450 putative cytochrome P450... 0.01 Gene family
Solyc03g112030.2.1 Solyc03g112030.2 26.10 misc.cytochrome P450 putative cytochrome P450... 0.03 Gene family
Solyc12g044983.1.1 Solyc12g044983.1 26.10 misc.cytochrome P450 putative cytochrome P450... 0.02 Gene family
Solyc12g045020.2.1 Solyc12g045020.2 16.2.1.8 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan
MF GO:0020037 heme binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001128 Cyt_P450 62 509
No external refs found!