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  5. Aspi01Gene02227.t1

Aspi01Gene02227.t1 (SIZ1, ATSIZ1, Aspi01Gene02227)


Aliases : SIZ1, ATSIZ1, Aspi01Gene02227

Description : E3 SUMO ubiquitin ligase *(SIZ1) & original description: none


Gene families : OG0002076 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene02227.t1

Target Alias Description ECC score Gene Family Method Actions
Als_g16402 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g62439 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Cre12.g500900 SIZ1, ATSIZ1 Protein degradation.peptide... 0.01 OrthoFinder output from all 47 species
Gb_29862 SIZ1, ATSIZ1 SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species
LOC_Os03g50980.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species
LOC_Os05g03430.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.03 OrthoFinder output from all 47 species
Lfl_g13950 SIZ1, ATSIZ1 E3 SUMO ubiquitin ligase *(SIZ1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_159932g0010 SIZ1, ATSIZ1 E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g069160.3.1 SIZ1, ATSIZ1,... SUMO E3 ligase (SIZ1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004181 Znf_MIZ 137 185
No external refs found!