AMTR_s00106p00139270 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.110

Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT1 alpha subunit

Gene families : OG_01_0004201 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004201_tree ,
OG_02_0004989 (LandPlants) Phylogenetic Tree(s): OG_02_0004989_tree ,
OG_03_0006808 (SeedPlants) Phylogenetic Tree(s): OG_03_0006808_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00106p00139270
Cluster	HCCA: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
AT3G20050	TCP-1, ATTCP-1	T-complex protein 1 alpha subunit	0.05	Archaeplastida
Cpa\|evm.model.tig00021350.16	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	Archaeplastida
Cre10.g439100	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	Archaeplastida
GSVIVT01018213001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	Archaeplastida
Gb_09465	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.05	Archaeplastida
LOC_Os04g46620.1	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.07	Archaeplastida
MA_21256g0010	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.04	Archaeplastida
Mp7g01530.1	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.05	Archaeplastida
Pp3c11_2110V3.1	No alias	T-complex protein 1 alpha subunit	0.04	Archaeplastida
Pp3c1_900V3.1	No alias	T-complex protein 1 alpha subunit	0.02	Archaeplastida
Pp3c7_24640V3.1	No alias	T-complex protein 1 alpha subunit	0.03	Archaeplastida
Smo167342	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.06	Archaeplastida
Solyc01g090750.3.1	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.06	Archaeplastida
Zm00001e016095_P001	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.05	Archaeplastida
Zm00001e023719_P001	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.05	Archaeplastida
AT3G20050	TCP-1, ATTCP-1	T-complex protein 1 alpha subunit	0.05	LandPlants
GSVIVT01018213001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	LandPlants
Gb_09465	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.04	LandPlants
LOC_Os04g46620.1	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.07	LandPlants
MA_21256g0010	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.04	LandPlants
Mp7g01530.1	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.04	LandPlants
Pp3c11_2110V3.1	No alias	T-complex protein 1 alpha subunit	0.03	LandPlants
Pp3c1_900V3.1	No alias	T-complex protein 1 alpha subunit	0.01	LandPlants
Pp3c7_24640V3.1	No alias	T-complex protein 1 alpha subunit	0.03	LandPlants
Smo167342	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.05	LandPlants
Solyc01g090750.3.1	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.06	LandPlants
Zm00001e016095_P001	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.05	LandPlants
Zm00001e023719_P001	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.04	LandPlants
AT3G20050	TCP-1, ATTCP-1	T-complex protein 1 alpha subunit	0.05	SeedPlants
GSVIVT01018213001	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.03	SeedPlants
Gb_09465	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.04	SeedPlants
LOC_Os04g46620.1	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.07	SeedPlants
MA_21256g0010	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.04	SeedPlants
Solyc01g090750.3.1	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.06	SeedPlants
Zm00001e016095_P001	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.05	SeedPlants
Zm00001e023719_P001	No alias	CCT1 subunit alpha of CCT chaperonin folding complex	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	31	535

External Links

No external refs found!

AMTR_s00106p00139270 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation