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  5. Aspi01Gene01893.t1

Aspi01Gene01893.t1 (Aspi01Gene01893)


Aliases : Aspi01Gene01893

Description : transcription factor *(REVEILLE) & original description: none


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene01893.t1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00261430 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.evening element... 0.03 OrthoFinder output from all 47 species
AMTR_s00001p00272270 LHY1, LHY,... Multi-process regulation.circadian clock.core oscillator... 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00237480 evm_27.TU.AmTr_v1... Multi-process regulation.circadian clock.evening element... 0.02 OrthoFinder output from all 47 species
AT1G01060 LHY1, LHY Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G46830 CCA1 circadian clock associated 1 0.06 OrthoFinder output from all 47 species
AT5G17300 RVE1 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g15171 RVE1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000277 No alias circadian clock factor *(REVEILLE) & original... 0.05 OrthoFinder output from all 47 species
Cba_g15416 RVE1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G087900.1 RVE2, CIR1,... transcription factor *(REVEILLE) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G032400.1 RVE2, CIR1,... transcription factor *(REVEILLE) & original description:... 0.05 OrthoFinder output from all 47 species
Cre06.g275350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01025544001 No alias Multi-process regulation.circadian clock.evening element... 0.04 OrthoFinder output from all 47 species
GSVIVT01027456001 CCA1 Multi-process regulation.circadian clock.core oscillator... 0.05 OrthoFinder output from all 47 species
GSVIVT01035231001 RVE1 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Gb_25658 RVE1 transcription factor (MYB-related). circadian clock core... 0.03 OrthoFinder output from all 47 species
Gb_28874 LHY1, LHY transcription factor (MYB-related). circadian clock core... 0.04 OrthoFinder output from all 47 species
LOC_Os02g45670.1 LOC_Os02g45670 transcription factor (MYB-related). REVEILLE circadian... 0.03 OrthoFinder output from all 47 species
LOC_Os06g01670.1 LOC_Os06g01670 transcription factor (MYB-related). REVEILLE circadian... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06110.3 LHY1, LHY, LOC_Os08g06110 transcription factor (MYB-related). circadian clock core... 0.04 OrthoFinder output from all 47 species
Len_g19700 RVE1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.03 OrthoFinder output from all 47 species
Msp_g26311 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16771 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42013 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g51660 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g098320.4.1 RVE1, Solyc03g098320 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc10g005080.3.1 LHY1, LHY, Solyc10g005080 transcription factor (MYB-related). circadian clock core... 0.04 OrthoFinder output from all 47 species
Solyc10g084370.3.1 Solyc10g084370 transcription factor (MYB-related). REVEILLE circadian... 0.03 OrthoFinder output from all 47 species
Spa_g46612 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07353 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006465_P001 Zm00001e006465 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Zm00001e013333_P002 RVE2, CIR1,... transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e016853_P001 Zm00001e016853 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e021724_P005 LHY1, LHY, Zm00001e021724 transcription factor (MYB-related). circadian clock core... 0.04 OrthoFinder output from all 47 species
Zm00001e023232_P002 Zm00001e023232 transcription factor (MYB-related). REVEILLE circadian... 0.03 OrthoFinder output from all 47 species
Zm00001e040217_P001 LHY1, LHY, Zm00001e040217 circadian clock core oscillator protein (LHY|CCA1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 59 102
IPR000477 RT_dom 192 267
No external refs found!