Aspi01Gene01890.t1 (Aspi01Gene01890)

Aliases : Aspi01Gene01890

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene01890.t1

Target	Alias	Description	ECC score	Gene Family Method
AT2G36710	No alias	Pectin lyase-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G07430	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
Ala_g16581	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g56348	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G069000.1	Ceric.10G069000	pectin methylesterase & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.14G007600.1	Ceric.14G007600	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Len_g31415	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g38524	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ppi_g10459	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091	No alias	pectin methylesterase & original description: CDS=1-882	0.03	OrthoFinder output from all 47 species
Sam_g37525	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g079180.4.1	Solyc01g079180	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Solyc09g091730.4.1	Solyc09g091730	pectin methylesterase	0.01	OrthoFinder output from all 47 species
Spa_g00755	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e040018_P001	Zm00001e040018	pectin methylesterase	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	22	309

External Links

No external refs found!

Aspi01Gene01890.t1 (Aspi01Gene01890)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation