Aspi01Gene01661.t1 (ABCG40, PDR12,...)

Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, Aspi01Gene01661

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene01661.t1
Cluster	HCCA: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00117010	PEN3, ABCG36,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s00069p00191700	PDR11, ATPDR11,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
AT4G15215	ATPDR13, PDR13	pleiotropic drug resistance 13	0.03	OrthoFinder output from all 47 species
AT4G15233	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	OrthoFinder output from all 47 species
Aob_g28174	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g03117	ABCG40, PDR12,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g06778	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g20545	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0098.g043944	PEN3, ABCG36,...	subfamily ABCG transporter & original description: CDS=1-4371	0.04	OrthoFinder output from all 47 species
Ceric.04G041200.1	PDR6, ATPDR6,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000900.8	ATPDR3, PDR3	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Dde_g05962	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01017201001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01031378001	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_30095	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Gb_34606	PEN3, ABCG36,...	subfamily ABCG transporter	0.06	OrthoFinder output from all 47 species
Gb_37007	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os07g33780.1	PDR6, ATPDR6,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Len_g47391	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.06	OrthoFinder output from all 47 species
MA_184352g0010	ABCG40, PDR12,...	ABC transporter G family member 36 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_42871g0020	PEN3, ABCG36,...	ABC transporter G family member 40 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_964768g0010	ABCG40, PDR12,...	ABC transporter G family member 39 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Mp1g25350.1	ATPDR7, PDR7	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Mp2g21800.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Ore_g22919	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g14833	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g38837	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g62897	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo118688	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo235359	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.06	OrthoFinder output from all 47 species
Smo417272	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc12g019640.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e019932_P002	PEN3, ABCG36,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Zm00001e024257_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e024978_P001	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Zm00001e026148_P001	PDR6, ATPDR6,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Zm00001e033689_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Zm00001e040575_P001	PDR6, ATPDR6,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR029481	ABC_trans_N	83	132
IPR043926	ABCG_dom	1066	1135
IPR043926	ABCG_dom	372	450
IPR003439	ABC_transporter-like_ATP-bd	157	339
IPR013581	PDR_assoc	710	774
IPR013525	ABC_2_trans	493	705
IPR013525	ABC_2_trans	1183	1395
IPR003439	ABC_transporter-like_ATP-bd	885	1037

External Links

No external refs found!

Aspi01Gene01661.t1 (ABCG40, PDR12,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation