Aspi01Gene01661.t1 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, Aspi01Gene01661

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene01661.t1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00117010 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00191700 PDR11, ATPDR11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AT4G15215 ATPDR13, PDR13 pleiotropic drug resistance 13 0.03 OrthoFinder output from all 47 species
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 OrthoFinder output from all 47 species
Aob_g28174 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03117 ABCG40, PDR12,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06778 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20545 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0098.g043944 PEN3, ABCG36,... subfamily ABCG transporter & original description: CDS=1-4371 0.04 OrthoFinder output from all 47 species
Ceric.04G041200.1 PDR6, ATPDR6,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000900.8 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Dde_g05962 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017201001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01031378001 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_30095 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Gb_34606 PEN3, ABCG36,... subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Gb_37007 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os07g33780.1 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Len_g47391 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
MA_184352g0010 ABCG40, PDR12,... ABC transporter G family member 36 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_42871g0020 PEN3, ABCG36,... ABC transporter G family member 40 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_964768g0010 ABCG40, PDR12,... ABC transporter G family member 39 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Mp1g25350.1 ATPDR7, PDR7 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp2g21800.1 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Ore_g22919 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14833 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38837 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62897 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo118688 PDR11, ATPDR11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo235359 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.06 OrthoFinder output from all 47 species
Smo417272 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc12g019640.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e019932_P002 PEN3, ABCG36,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e024257_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e024978_P001 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e026148_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e033689_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e040575_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029481 ABC_trans_N 83 132
IPR043926 ABCG_dom 1066 1135
IPR043926 ABCG_dom 372 450
IPR003439 ABC_transporter-like_ATP-bd 157 339
IPR013581 PDR_assoc 710 774
IPR013525 ABC_2_trans 493 705
IPR013525 ABC_2_trans 1183 1395
IPR003439 ABC_transporter-like_ATP-bd 885 1037
No external refs found!