Aliases : PUB14, ATPUB14, Aspi01Gene01377
Description : not classified & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00267930 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 19 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00007p00217990 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00086p00031680 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT1G10560 | PUB18, ATPUB18 | plant U-box 18 | 0.03 | OrthoFinder output from all 47 species | |
AT1G23030 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G60190 | No alias | ARM repeat superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G58680 | No alias | ARM repeat superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g09883 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g03799 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g07222 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g16594 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g31832 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g01685 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g00484 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g19192 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g19819 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene59227.t1 | ATPUB17, PUB17,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0110.g045492 | ATPUB17, PUB17 | not classified & original description: CDS=1-2295 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0292.g063403 | No alias | not classified & original description: CDS=1-2253 | 0.03 | OrthoFinder output from all 47 species | |
Ceric.34G042900.1 | PUB13, ATPUB13,... | not classified & original description: pacid=50623547... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g08066 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g09044 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g35890 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g44834 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g02331 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g11164 | PUB12, AtPUB12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009347001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01020229001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01021265001 | ATPUB17, PUB17 | U-box domain-containing protein 17 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01026372001 | PUB9, ATPUB9 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01036669001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_10627 | PUB8, B80 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Gb_10871 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
Gb_29276 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g32100.1 | LOC_Os03g32100 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g39930.1 | LOC_Os05g39930 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Len_g20959 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_29517g0010 | No alias | U-box domain-containing protein 12 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g16068 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g31758 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g37725 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g03120 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g07136 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g38088 | ATPUB17, PUB17 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Pnu_g00828 | PUB12, AtPUB12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g03502 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g17953 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g26740 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g04356 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g06266 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g30958 | PUB13, ATPUB13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000382 | No alias | not classified & original description: CDS=1-1704 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0007.g003607 | ATPUB17, PUB17 | not classified & original description: CDS=1-2595 | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0011.g005097 | No alias | not classified & original description: CDS=1-2154 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0073.g017096 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: CDS=1-1548 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g06298 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g114160.1.1 | Solyc03g114160 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g077850.3.1 | Solyc04g077850 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g008230.3.1 | Solyc05g008230 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g076040.3.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g008390.2.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g07392 | PUB15 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g18762 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g24085 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g25117 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g01104 | No alias | E3 ubiquiTin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g10003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g14575 | PUB18, ATPUB18 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014566_P002 | PUB9, ATPUB9,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018578_P001 | Zm00001e018578 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019429_P001 | Zm00001e019429 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e028839_P001 | Zm00001e028839 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e031915_P001 | Zm00001e031915 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e034012_P001 | Zm00001e034012 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |