Aspi01Gene01267.t2 (CRR2, Aspi01Gene01267)


Aliases : CRR2, Aspi01Gene01267

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene01267.t2
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00232p00000850 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g21090... 0.02 OrthoFinder output from all 47 species
AMTR_s00587p00011650 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
AT2G13600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G20770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G04780 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003802 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g17512 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g23493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g36540 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07067 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene18566.t1 Aspi01Gene18566 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0028.g023921 No alias not classified & original description: CDS=1-2157 0.01 OrthoFinder output from all 47 species
Cba_g75109 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G036800.1 VAC1, ECB2,... not classified & original description: pacid=50605276... 0.03 OrthoFinder output from all 47 species
Dac_g05532 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g34941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g04041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05745 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06366 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25892 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26044 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50128 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50137 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003453001 OTP80 RNA processing.organelle machineries.RNA... 0.01 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
GSVIVT01011887001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
GSVIVT01024061001 No alias Pentatricopeptide repeat-containing protein At2g21090... 0.02 OrthoFinder output from all 47 species
GSVIVT01024912001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
GSVIVT01028697001 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.01 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
LOC_Os01g10800.1 DOT4, LOC_Os01g10800 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.01 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g53630.1 LOC_Os04g53630 Pentatricopeptide repeat-containing protein At3g20730... 0.02 OrthoFinder output from all 47 species
LOC_Os11g24530.1 LOC_Os11g24530 Pentatricopeptide repeat-containing protein At2g35030,... 0.02 OrthoFinder output from all 47 species
Len_g12392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07406 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34604 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429069g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_10435641g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
MA_36655g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.01 OrthoFinder output from all 47 species
Msp_g33995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23627 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43235 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14457 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57347 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63861 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10481 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53953 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61143 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo70183 OTP84 Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.01 OrthoFinder output from all 47 species
Solyc06g062610.2.1 Solyc06g062610 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.01 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g19925 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007600_P001 Zm00001e007600 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 238 269
IPR046848 E_motif 288 350
IPR002885 Pentatricopeptide_repeat 145 165
IPR002885 Pentatricopeptide_repeat 170 217
No external refs found!