1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene01020.t1

Aspi01Gene01020.t1 (ATPIN1, PIN1, Aspi01Gene01020)


Aliases : ATPIN1, PIN1, Aspi01Gene01020

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene01020.t1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00079560 PIN7, ATPIN7,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
AT1G77110 PIN6 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
Adi_g050328 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene04220.t1 PIN3, ATPIN3,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08211 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02807 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26392 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031663001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
LOC_Os01g58860.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Msp_g20007 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04385 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15666 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011672 PIN6 auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Tin_g30859 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024071_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Zm00001e036414_P001 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e037682_P001 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 191
No external refs found!