Aspi01Gene00837.t1 (SRCAP, PIE1, chr13,...)

Aliases : SRCAP, PIE1, chr13, Aspi01Gene00837

Description : ATPase component *(PIE1) of SWR1 chromatin remodeling complex & original description: none

Gene families : OG0002986 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002986_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene00837.t1
Cluster	HCCA: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method
Ala_g20021	SRCAP, PIE1, chr13	ATPase component *(PIE1) of SWR1 chromatin remodeling...	0.03	OrthoFinder output from all 47 species
Ala_g21115	SRCAP, PIE1, chr13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.22G011100.1	SRCAP, PIE1,...	ATPase component *(PIE1) of SWR1 chromatin remodeling...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.26	SRCAP, PIE1, chr13	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1...	0.02	OrthoFinder output from all 47 species
Cre14.g618860	SRCAP, PIE1, chr13	Chromatin organisation.chromatin remodeling...	0.01	OrthoFinder output from all 47 species
Dcu_g39491	SRCAP, PIE1, chr13	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_9456975g0010	SRCAP, PIE1, chr13	Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1...	0.02	OrthoFinder output from all 47 species
Msp_g48381	SRCAP, PIE1, chr13	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g13998	SRCAP, PIE1, chr13	ATPase component *(PIE1) of SWR1 chromatin remodeling...	0.06	OrthoFinder output from all 47 species
Nbi_g22822	SRCAP, PIE1, chr13	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	994	1105
IPR000330	SNF2_N	467	739

External Links

No external refs found!