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  5. Aspi01Gene00477.t1

Aspi01Gene00477.t1 (SYP125, ATSYP125,...)


Aliases : SYP125, ATSYP125, Aspi01Gene00477

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene00477.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00050990 SYP121,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.03 OrthoFinder output from all 47 species
Adi_g081976 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Ala_g08621 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aob_g01068 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aob_g02813 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03950.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Azfi_s0220.g058684 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dac_g03186 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Dde_g18785 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
GSVIVT01006716001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
Mp2g19600.1 SYP132, ATSYP132 SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Nbi_g04229 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ore_g26913 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ore_g35421 SYP123, ATSYP123 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sam_g11700 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Smo151097 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Smo25349 SYP125, ATSYP125 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Smo74098 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Solyc01g006950.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Spa_g04676 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Tin_g03937 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 254 306
IPR006011 Syntaxin_N 50 253
No external refs found!