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  5. Aspi01Gene00049.t1

Aspi01Gene00049.t1 (Aspi01Gene00049)


Aliases : Aspi01Gene00049

Description : not classified & original description: none


Gene families : OG0001844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene00049.t1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Ala_g31981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01500 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g09510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11165 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g49481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07148 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59906.t1 Aspi01Gene59906 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59911.t1 Aspi01Gene59911 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59920.t1 Aspi01Gene59920 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59922.t1 Aspi01Gene59922 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59924.t1 Aspi01Gene59924 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59974.t1 Aspi01Gene59974 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.20G034900.1 Ceric.20G034900 not classified & original description: pacid=50567097... 0.03 OrthoFinder output from all 47 species
Dac_g08686 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34923 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g37918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47988 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g47263 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g23010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g54165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g64045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013785 No alias not classified & original description: CDS=174-989 0.04 OrthoFinder output from all 47 species
Spa_g04807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018952_P002 Zm00001e018952 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IEA Interproscan
BP GO:0009664 plant-type cell wall organization IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006706 Extensin_dom 564 603
IPR006706 Extensin_dom 901 943
IPR006706 Extensin_dom 791 833
IPR006706 Extensin_dom 620 673
IPR006706 Extensin_dom 184 226
IPR006706 Extensin_dom 801 843
IPR006706 Extensin_dom 553 593
No external refs found!