AMTR_s00106p00119930 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.91

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein

Gene families : OG_01_0000342 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000342_tree ,
OG_02_0001792 (LandPlants) Phylogenetic Tree(s): OG_02_0001792_tree ,
OG_03_0001989 (SeedPlants) Phylogenetic Tree(s): OG_03_0001989_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00106p00119930
Cluster	HCCA: Cluster_170

Target	Alias	Description	ECC score	Gene Family Method
AT1G26230	No alias	TCP-1/cpn60 chaperonin family protein	0.05	Archaeplastida
AT1G55490	CPN60B, LEN1	chaperonin 60 beta	0.07	Archaeplastida
AT2G28000	CH-CPN60A, CPN60A, SLP	chaperonin-60alpha	0.05	Archaeplastida
AT5G18820	EMB3007	TCP-1/cpn60 chaperonin family protein	0.02	Archaeplastida
ChrSy.fgenesh.mRNA.28	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.05	Archaeplastida
Cpa\|evm.model.tig00001107.20	No alias	RuBisCO large subunit-binding protein subunit alpha,...	0.01	Archaeplastida
Cre04.g231222	No alias	External stimuli response.temperature.Hsp...	0.06	Archaeplastida
Cre07.g339150	No alias	External stimuli response.temperature.Hsp...	0.05	Archaeplastida
Cre17.g741450	No alias	External stimuli response.temperature.Hsp...	0.03	Archaeplastida
GSVIVT01010149001	No alias	External stimuli response.temperature.Hsp...	0.04	Archaeplastida
GSVIVT01017032001	No alias	External stimuli response.temperature.Hsp...	0.03	Archaeplastida
GSVIVT01031526001	No alias	External stimuli response.temperature.Hsp...	0.03	Archaeplastida
Gb_25193	No alias	RuBisCO large subunit-binding protein subunit beta,...	0.03	Archaeplastida
LOC_Os06g02380.2	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.04	Archaeplastida
LOC_Os09g38980.1	No alias	subunit alpha of Cpn60 chaperonin complex. component...	0.02	Archaeplastida
LOC_Os12g17910.1	No alias	subunit alpha of Cpn60 chaperonin complex. component...	0.04	Archaeplastida
MA_13240g0020	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_542957g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_97627g0010	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.02	Archaeplastida
Mp1g21640.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.06	Archaeplastida
Mp5g20470.1	No alias	subunit alpha of Cpn60 chaperonin complex. component...	0.06	Archaeplastida
Pp3c16_4660V3.1	No alias	chaperonin 60 beta	0.03	Archaeplastida
Pp3c24_12180V3.1	No alias	chaperonin-60alpha	0.02	Archaeplastida
Pp3c27_5110V3.1	No alias	chaperonin 60 beta	0.02	Archaeplastida
Pp3c4_22500V3.1	No alias	heat shock protein 60	0.02	Archaeplastida
Pp3c6_20400V3.1	No alias	chaperonin 60 beta	0.04	Archaeplastida
Pp3c8_16290V3.1	No alias	chaperonin-60alpha	0.04	Archaeplastida
Smo168153	No alias	External stimuli response.temperature.Hsp...	0.06	Archaeplastida
Solyc01g028810.3.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.05	Archaeplastida
Solyc03g120850.4.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.05	Archaeplastida
Solyc05g010240.4.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.02	Archaeplastida
Solyc11g069790.2.1	No alias	subunit alpha of Cpn60 chaperonin complex. component...	0.04	Archaeplastida
Zm00001e001025_P002	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.03	Archaeplastida
Zm00001e012733_P002	No alias	chaperone (Hsp60)	0.01	Archaeplastida
Zm00001e029825_P001	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.09	Archaeplastida
Zm00001e031536_P001	No alias	subunit alpha of Cpn60 chaperonin complex. component...	0.05	Archaeplastida
AT1G26230	No alias	TCP-1/cpn60 chaperonin family protein	0.04	LandPlants
AT1G55490	CPN60B, LEN1	chaperonin 60 beta	0.06	LandPlants
AT3G13470	No alias	TCP-1/cpn60 chaperonin family protein	0.02	LandPlants
ChrSy.fgenesh.mRNA.28	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.03	LandPlants
GSVIVT01010149001	No alias	External stimuli response.temperature.Hsp...	0.03	LandPlants
GSVIVT01017032001	No alias	External stimuli response.temperature.Hsp...	0.03	LandPlants
GSVIVT01025490001	No alias	External stimuli response.temperature.Hsp...	0.03	LandPlants
Gb_25193	No alias	RuBisCO large subunit-binding protein subunit beta,...	0.02	LandPlants
LOC_Os02g01280.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.02	LandPlants
LOC_Os06g02380.2	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.05	LandPlants
MA_542957g0010	No alias	no hits & (original description: none)	0.02	LandPlants
MA_97627g0010	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.03	LandPlants
Mp1g21640.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.07	LandPlants
Pp3c16_4660V3.1	No alias	chaperonin 60 beta	0.03	LandPlants
Pp3c27_5110V3.1	No alias	chaperonin 60 beta	0.03	LandPlants
Pp3c6_20400V3.1	No alias	chaperonin 60 beta	0.05	LandPlants
Smo168153	No alias	External stimuli response.temperature.Hsp...	0.03	LandPlants
Solyc01g028810.3.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.06	LandPlants
Solyc03g120850.4.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.04	LandPlants
Solyc05g010240.4.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.02	LandPlants
Zm00001e001025_P002	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.03	LandPlants
Zm00001e029825_P001	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.09	LandPlants
Zm00001e036666_P003	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.02	LandPlants
AT1G26230	No alias	TCP-1/cpn60 chaperonin family protein	0.03	SeedPlants
AT1G55490	CPN60B, LEN1	chaperonin 60 beta	0.06	SeedPlants
AT3G13470	No alias	TCP-1/cpn60 chaperonin family protein	0.02	SeedPlants
ChrSy.fgenesh.mRNA.28	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.03	SeedPlants
GSVIVT01010149001	No alias	External stimuli response.temperature.Hsp...	0.02	SeedPlants
GSVIVT01017032001	No alias	External stimuli response.temperature.Hsp...	0.03	SeedPlants
GSVIVT01025490001	No alias	External stimuli response.temperature.Hsp...	0.03	SeedPlants
Gb_25193	No alias	RuBisCO large subunit-binding protein subunit beta,...	0.01	SeedPlants
LOC_Os02g01280.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.02	SeedPlants
LOC_Os06g02380.2	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.05	SeedPlants
MA_542957g0010	No alias	no hits & (original description: none)	0.02	SeedPlants
MA_97627g0010	No alias	Chaperonin 60 subunit beta 2, chloroplastic...	0.03	SeedPlants
Solyc01g028810.3.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.06	SeedPlants
Solyc03g120850.4.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.04	SeedPlants
Solyc05g010240.4.1	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.02	SeedPlants
Zm00001e001025_P002	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.03	SeedPlants
Zm00001e029825_P001	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.08	SeedPlants
Zm00001e036666_P003	No alias	subunit beta of Cpn60 chaperonin complex. component...	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	91	594

External Links

No external refs found!

AMTR_s00106p00119930 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation