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  5. Dcu_g51830

Dcu_g51830


Description : not classified & original description: none


Gene families : OG0005882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005882_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g51830
Cluster HCCA: Cluster_511

Target Alias Description ECC score Gene Family Method Actions
Dac_g38120 ACAM-2, CAM5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33465 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39841 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g33440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g01661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g15688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27609 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28118 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g31072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g31485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006027 glycosaminoglycan catabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009253 peptidoglycan catabolic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 38 101
No external refs found!