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  5. Dcu_g51248

Dcu_g51248


Description : nucleocytoplasmic transport karyopherin *(XPO4) & original description: none


Gene families : OG0004951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004951_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g51248
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Ala_g08098 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.04 OrthoFinder output from all 47 species
Als_g12362 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene49965.t1 Aspi01Gene49965 nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Cba_g01324 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.98 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre09.g404350 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Gb_04408 No alias XPO4 nucleocytoplasmic transport karyopherin 0.03 OrthoFinder output from all 47 species
LOC_Os10g33710.1 LOC_Os10g33710 XPO4 nucleocytoplasmic transport karyopherin 0.04 OrthoFinder output from all 47 species
MA_16344g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g11820 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.02 OrthoFinder output from all 47 species
Pir_g14675 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.03 OrthoFinder output from all 47 species
Ppi_g59351 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.02 OrthoFinder output from all 47 species
Smo406082 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Solyc12g027580.3.1 Solyc12g027580 XPO4 nucleocytoplasmic transport karyopherin 0.03 OrthoFinder output from all 47 species
Spa_g08548 No alias nucleocytoplasmic transport karyopherin *(XPO4) &... 0.05 OrthoFinder output from all 47 species
Zm00001e004578_P001 Zm00001e004578 XPO4 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!