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  5. Dcu_g50146

Dcu_g50146


Description : snoRNP rRNA methylation complex assembly factor *(NUFIP) & original description: none


Gene families : OG0003682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g50146

Target Alias Description ECC score Gene Family Method Actions
Ala_g22823 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Aob_g11786 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.06 OrthoFinder output from all 47 species
Aop_g08132 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Ceric.30G030300.1 Ceric.30G030300 not classified & original description: pacid=50608069... 0.03 OrthoFinder output from all 47 species
LOC_Os01g59860.1 LOC_Os01g59860 NUFIP snoRNP rRNA methylation complex assembly factor 0.03 OrthoFinder output from all 47 species
MA_10431482g0010 No alias NUFIP snoRNP rRNA methylation complex assembly factor 0.02 OrthoFinder output from all 47 species
MA_30455g0010 No alias NUFIP snoRNP rRNA methylation complex assembly factor 0.02 OrthoFinder output from all 47 species
Pnu_g23882 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Pp3c27_4140V3.1 Pp3c27_4140 No annotation 0.02 OrthoFinder output from all 47 species
Solyc01g096920.3.1 Solyc01g096920 NUFIP snoRNP rRNA methylation complex assembly factor 0.03 OrthoFinder output from all 47 species
Tin_g18803 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR019496 NUFIP1_cons_dom 602 639
No external refs found!