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  5. Dcu_g49996

Dcu_g49996


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g49996

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0007.g010584 No alias not classified & original description: CDS=134-2257 0.05 OrthoFinder output from all 47 species
Azfi_s0120.g046799 No alias not classified & original description: CDS=1-2385 0.08 OrthoFinder output from all 47 species
Azfi_s0228.g059086 No alias not classified & original description: CDS=12-1547 0.08 OrthoFinder output from all 47 species
Dcu_g13517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26473 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g36893 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dcu_g38651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39805 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39981 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g03575 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06227 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15565 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28962 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06522 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 79 108
IPR046848 E_motif 130 162
IPR002885 Pentatricopeptide_repeat 12 58
No external refs found!