1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g49763

Dcu_g49763


Description : core component *(RBX1) of CULLIN-based E3 ubiquitin ligase complexes & original description: none


Gene families : OG0002121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002121_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g49763

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00244120 HRT1, ATRBX1,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.03 OrthoFinder output from all 47 species
Als_g08529 HRT1, ATRBX1, RBX1, ROC1 core component *(RBX1) of CULLIN-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Als_g25420 APC11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g01700.1 LOC_Os01g01700 RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... 0.02 OrthoFinder output from all 47 species
LOC_Os02g47870.1 LOC_Os02g47870 RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... 0.02 OrthoFinder output from all 47 species
Lfl_g29347 No alias core component *(RBX1) of CULLIN-based E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
MA_10427994g0010 No alias RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... 0.04 OrthoFinder output from all 47 species
Nbi_g05531 No alias core component *(RBX1) of CULLIN-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Ore_g29650 APC11 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g01085 HRT1, ATRBX1, RBX1, ROC1 core component *(RBX1) of CULLIN-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc12g009120.2.1 HRT1, ATRBX1,... RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... 0.07 OrthoFinder output from all 47 species
Spa_g17821 HRT1, ATRBX1, RBX1, ROC1 core component *(RBX1) of CULLIN-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Tin_g10572 HRT1, ATRBX1, RBX1, ROC1 core component *(RBX1) of CULLIN-based E3 ubiquiTin... 0.02 OrthoFinder output from all 47 species
Zm00001e017143_P001 Zm00001e017143 RUB ligase E3 protein (RBX1). UBQ-E2-recruiting... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 90 148
No external refs found!