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  5. Dcu_g48948

Dcu_g48948


Description : component *(MED26) of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g48948

Target Alias Description ECC score Gene Family Method Actions
Adi_g078815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14915 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Aob_g07318 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Aob_g15707 No alias component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Aspi01Gene10769.t1 Aspi01Gene10769 component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Aspi01Gene30064.t1 Aspi01Gene30064 component *(MED26) of MEDIATOR transcription... 0.05 OrthoFinder output from all 47 species
Aspi01Gene69253.t1 Aspi01Gene69253 component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025894 No alias not classified & original description: CDS=217-1497 0.04 OrthoFinder output from all 47 species
Azfi_s0051.g031339 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Cba_g32236 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ceric.15G055300.1 Ceric.15G055300 component *(MED26) of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Nbi_g27629 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Ppi_g17469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003699 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Sam_g29122 No alias component *(MED26) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Solyc04g071520.3.1 Solyc04g071520 Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder output from all 47 species
Solyc11g005450.3.1 Solyc11g005450 Probable mediator of RNA polymerase II transcription... 0.03 OrthoFinder output from all 47 species
Zm00001e038156_P001 Zm00001e038156 component MED26 of MEDIATOR transcription co-activator complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 142 192
No external refs found!