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  5. Dcu_g48895

Dcu_g48895


Description : transcription termination factor *(TTF1) & original description: none


Gene families : OG0003814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g48895

Target Alias Description ECC score Gene Family Method Actions
AT5G41020 No alias myb family transcription factor 0.02 OrthoFinder output from all 47 species
Aop_g12801 No alias transcription termination factor *(TTF1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.38G041200.1 Ceric.38G041200 transcription termination factor *(TTF1) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os06g19980.1 LOC_Os06g19980 transcription termination factor (TTF1). transcription... 0.02 OrthoFinder output from all 47 species
Len_g11777 No alias transcription termination factor *(TTF1) & original... 0.04 OrthoFinder output from all 47 species
MA_10431881g0010 No alias transcription termination factor (TTF1). transcription... 0.02 OrthoFinder output from all 47 species
Pir_g65841 No alias transcription termination factor *(TTF1) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g019800.4.1 Solyc03g019800 transcription termination factor (TTF1). transcription... 0.04 OrthoFinder output from all 47 species
Zm00001e021684_P001 Zm00001e021684 transcription termination factor (TTF1). transcription... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 448 491
No external refs found!