Dcu_g48837


Description : component *(uS17) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001674 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001674_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g48837

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00158320 EMB1080,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT3G48930 EMB1080 Nucleic acid-binding, OB-fold-like protein 0.03 OrthoFinder output from all 47 species
Adi_g014139 No alias component *(uS17) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000551.22 EMB1080 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Cre12.g514500 EMB1080 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01012877001 EMB1080 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01035927001 EMB1080 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os04g42380.1 EMB1080, LOC_Os04g42380 component RPS11 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os04g52361.1 EMB1080, LOC_Os04g52361 component RPS11 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os08g10608.1 RPS11-BETA,... component RPS11 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp6g10500.1 EMB1080 component RPS11 of SSU proteome 0.02 OrthoFinder output from all 47 species
Pp3c2_13690V3.1 EMB1080, Pp3c2_13690 Nucleic acid-binding, OB-fold-like protein 0.01 OrthoFinder output from all 47 species
Pp3s116_30V3.1 EMB1080, Pp3s116_30 Nucleic acid-binding, OB-fold-like protein 0.01 OrthoFinder output from all 47 species
Sam_g12786 No alias component *(uS17) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Solyc06g073790.3.1 Solyc06g073790 component RPS11 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e006955_P001 RPS11-BETA,... component RPS11 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 118 186
IPR032440 Ribosomal_S11_N 48 116
No external refs found!