Dcu_g48743 (PTAC15)

Aliases : PTAC15

Description : mTERF-type transcription factor & original description: none

Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g48743
Cluster	HCCA: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00116710	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00010p00117910	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.07	OrthoFinder output from all 47 species
AMTR_s00010p00225250	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00225430	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00010p00230750	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00010p00235760	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.02	OrthoFinder output from all 47 species
AMTR_s00010p00236880	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00010p00239860	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00038p00175390	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00066p00157030	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00066p00157220	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00126p00036100	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
AMTR_s00126p00036130	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s00126p00036170	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AMTR_s02857p00005060	evm_27.TU.AmTr_v1...	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
AT1G21150	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
AT1G62010	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
AT3G46950	No alias	Mitochondrial transcription termination factor family protein	0.03	OrthoFinder output from all 47 species
Aev_g21849	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g05815	No alias	mTERF-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g07281	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g18494	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene64007.t1	Aspi01Gene64007	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g06519	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g12846	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14738	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.30G015700.1	Ceric.30G015700	mTERF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G027900.1	Ceric.31G027900	mTERF-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g18393	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g31748	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g14415	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g14645	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g25533	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01022213001	No alias	RNA biosynthesis.organelle...	0.05	OrthoFinder output from all 47 species
Gb_07257	PTAC15	TAC15 cofactor of plastid-encoded RNA polymerase....	0.03	OrthoFinder output from all 47 species
Gb_15878	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Gb_26176	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g33440.1	LOC_Os05g33440	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g33460.2	LOC_Os05g33460	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g12100.1	LOC_Os06g12100	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g24090.1	LOC_Os07g24090	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species
LOC_Os11g14130.1	LOC_Os11g14130	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Lfl_g08103	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_28540g0010	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
MA_31885g0010	No alias	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
MA_493420g0010	No alias	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Msp_g47549	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g18127	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g02037	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16904	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g35894	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g32867	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Smo403419	No alias	RNA biosynthesis.organelle...	0.03	OrthoFinder output from all 47 species
Smo77318	EMB93, SOLDAT10	RNA biosynthesis.organelle...	0.04	OrthoFinder output from all 47 species
Solyc04g011700.2.1	Solyc04g011700	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Solyc04g051880.3.1	Solyc04g051880	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Solyc04g072500.1.1	Solyc04g072500	transcription factor (mTERF)	0.04	OrthoFinder output from all 47 species
Zm00001e010589_P001	Zm00001e010589	transcription factor (mTERF)	0.03	OrthoFinder output from all 47 species
Zm00001e031638_P001	Zm00001e031638	transcription factor (mTERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	358	517
IPR003690	MTERF	317	397

External Links

No external refs found!

Dcu_g48743 (PTAC15)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation