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  5. Dcu_g48453

Dcu_g48453 (RNEE/G)


Aliases : RNEE/G

Description : endoribonuclease *(RNase E) & original description: none


Gene families : OG0005953 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005953_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g48453

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00182640 RNEE/G,... RNA processing.organelle machineries.ribonuclease... 0.03 OrthoFinder output from all 47 species
AT2G04270 RNEE/G RNAse E/G-like 0.04 OrthoFinder output from all 47 species
Ala_g23651 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G007300.1 RNEE/G, Ceric.10G007300 endoribonuclease *(RNase E) & original description:... 0.04 OrthoFinder output from all 47 species
LOC_Os08g23430.1 RNEE/G, LOC_Os08g23430 endoribonuclease (RNase E) 0.04 OrthoFinder output from all 47 species
Ppi_g01412 RNEE/G endoribonuclease *(RNase E) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g083140.3.1 RNEE/G, Solyc02g083140 endoribonuclease (RNase E) 0.02 OrthoFinder output from all 47 species
Tin_g19266 RNEE/G endoribonuclease *(RNase E) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002044 CBM_fam20 524 611
IPR019307 RNA-bd_AU-1/RNase_E/G 1105 1351
No external refs found!