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  5. Dcu_g48328

Dcu_g48328 (BIO1)


Aliases : BIO1

Description : bifunctional diaminopelargonic acid (DAPA) aminotransferase and dethiobiotin synthetase & original description: none


Gene families : OG0005448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g48328

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0033.g024994 BIO1 bifunctional diaminopelargonic acid (DAPA)... 0.03 OrthoFinder output from all 47 species
LOC_Os08g14770.1 BIO1, LOC_Os08g14770 bifunctional diaminopelargonic acid (DAPA)... 0.03 OrthoFinder output from all 47 species
Msp_g15384 BIO1 bifunctional diaminopelargonic acid (DAPA)... 0.03 OrthoFinder output from all 47 species
Sam_g23498 No alias bifunctional diaminopelargonic acid (DAPA)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008483 transaminase activity IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005814 Aminotrans_3 626 873
IPR005814 Aminotrans_3 461 548
No external refs found!