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  5. Dcu_g48293

Dcu_g48293


Description : SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex & original description: none


Gene families : OG0004724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004724_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g48293

Target Alias Description ECC score Gene Family Method Actions
Als_g22107 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Ehy_g21785 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
LOC_Os02g48810.1 LOC_Os02g48810 PHD finger protein At3g20280 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10430947g0010 No alias PHD finger protein At3g20280 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g09480.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g36191 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Solyc12g014540.2.1 Solyc12g014540 PHD finger protein At3g20280 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g09424 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Zm00001e023427_P001 Zm00001e023427 PHD finger protein At3g20280 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 387 434
IPR001025 BAH_dom 708 797
No external refs found!