Dcu_g47891


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g47891

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Adi_g004298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g007512 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g052739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g076358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087163 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111267 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g116582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12197 OSB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33897 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g13994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24367 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24418 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g37976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g07465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30199 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g31230 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g31748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33107 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39842 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g54958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g57160 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g62404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g40045 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03942.t1 Aspi01Gene03942 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38554.t1 VAC1, ECB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44451.t1 CRR2, Aspi01Gene44451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72349.t1 EMB2758, Aspi01Gene72349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05882 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g22830 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29871 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g35072 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g74880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08459 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08536 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g26473 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g35954 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36357 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36987 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g44864 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46754 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g47892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_37976 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g53944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_136188g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_20746g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g13272 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26038 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28658 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14886 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16487 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007167 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-3162 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016059 No alias not classified & original description: CDS=25-3486 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017091 No alias not classified & original description: CDS=1-3111 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017928 No alias not classified & original description: CDS=112-2919 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018966 No alias not classified & original description: CDS=1-2631 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022672 No alias not classified & original description: CDS=1-3558 0.03 OrthoFinder output from all 47 species
Sam_g12540 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g18667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.05 OrthoFinder output from all 47 species
Tin_g46024 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 92 116
IPR046848 E_motif 136 169
IPR002885 Pentatricopeptide_repeat 17 64
No external refs found!