Description : associated component *(AFR) of histone deacetylase machineries & original description: none
Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G19330 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.02 | OrthoFinder output from all 47 species | |
Als_g09801 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g03263 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0214.g058321 | NTMC2T5.1, NTMC2TYPE5.1 | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.18G085500.1 | Ceric.18G085500 | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.28G016000.1 | Ceric.28G016000 | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g57740.1 | LOC_Os02g57740 | associated component SAP30 of histone deacetylase machineries | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g08450.3 | LOC_Os04g08450 | associated component SAP30 of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species | |
Len_g14311 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g00912 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g12084 | No alias | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR025718 | SAP30_Sin3-bd | 220 | 273 |
No external refs found! |