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  5. AMTR_s00106p00065610

AMTR_s00106p00065610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.41

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG_01_0000067 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000067_tree ,
OG_02_0000498 (LandPlants) Phylogenetic Tree(s): OG_02_0000498_tree ,
OG_03_0000376 (SeedPlants) Phylogenetic Tree(s): OG_03_0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00065610
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT5G56840 No alias myb-like transcription factor family protein 0.05 Archaeplastida
GSVIVT01031975001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01031982001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_28926 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g44390.2 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os06g07640.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.05 Archaeplastida
MA_254136g0010 No alias transcription factor (MYB-related) 0.05 Archaeplastida
MA_41041g0010 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Pp3c9_19080V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc06g076770.3.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc08g078340.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e025946_P002 No alias transcription factor (MYB-related) 0.03 Archaeplastida
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.02 LandPlants
Solyc06g076770.3.1 No alias transcription factor (MYB-related) 0.02 LandPlants
Zm00001e031738_P001 No alias transcription factor (MYB-related) 0.03 LandPlants
AT3G11280 No alias Duplicated homeodomain-like superfamily protein 0.02 SeedPlants
Solyc06g076770.3.1 No alias transcription factor (MYB-related) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 4 47
IPR001005 SANT/Myb 121 165
No external refs found!