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  5. Dcu_g46706

Dcu_g46706


Description : component *(DDW) of ISWI chromatin remodeling complex & original description: none


Gene families : OG0002374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g46706

Target Alias Description ECC score Gene Family Method Actions
Ala_g12954 No alias component *(DDW) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0157.g053791 No alias component *(DDW) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01022419001 No alias No description available 0.03 OrthoFinder output from all 47 species
Lfl_g04929 No alias component *(DDW) of ISWI chromatin remodeling complex &... 0.05 OrthoFinder output from all 47 species
Ppi_g54459 No alias component *(DDW) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Sam_g08939 No alias component *(DDW) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Sam_g27903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17984 No alias component *(DDW) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e022717_P004 Zm00001e022717 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018501 DDT_dom 338 395
IPR028941 WHIM2_dom 643 709
IPR013136 WSTF_Acf1_Cbp146 24 121
No external refs found!