Dcu_g45946


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g45946

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00172690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g37170... 0.04 OrthoFinder output from all 47 species
AMTR_s00232p00000850 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g21090... 0.03 OrthoFinder output from all 47 species
AT3G49170 EMB2261 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004528 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g011562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036768 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05758 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06415 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07147 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13524 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19109 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20750 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26377 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g32399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g63667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07904 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03124 OTP82 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g03415 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g03709 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04906 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g06104 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g16007 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16515 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g16533 CRR22 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g16534 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g17678 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g18280 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g18614 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20531 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g21418 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27080 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28235 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28692 OTP82 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g28710 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g29854 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g29941 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33238 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g38568 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g61630 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67581 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g67877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68694 OTP84 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g70953 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g04691 EMB2261 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29524 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g30006 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G072400.1 Ceric.04G072400 not classified & original description: pacid=50630959... 0.04 OrthoFinder output from all 47 species
Ceric.06G036400.1 Ceric.06G036400 not classified & original description: pacid=50619976... 0.06 OrthoFinder output from all 47 species
Ceric.07G024400.1 Ceric.07G024400 not classified & original description: pacid=50626298... 0.03 OrthoFinder output from all 47 species
Ceric.07G030200.1 Ceric.07G030200 not classified & original description: pacid=50627452... 0.05 OrthoFinder output from all 47 species
Ceric.09G023800.1 Ceric.09G023800 not classified & original description: pacid=50587607... 0.05 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.04 OrthoFinder output from all 47 species
Ceric.09G065700.1 Ceric.09G065700 not classified & original description: pacid=50586915... 0.05 OrthoFinder output from all 47 species
Ceric.11G015500.1 Ceric.11G015500 not classified & original description: pacid=50594992... 0.06 OrthoFinder output from all 47 species
Ceric.14G027100.1 Ceric.14G027100 not classified & original description: pacid=50633502... 0.06 OrthoFinder output from all 47 species
Ceric.14G077900.1 Ceric.14G077900 not classified & original description: pacid=50634382... 0.09 OrthoFinder output from all 47 species
Ceric.18G008700.1 Ceric.18G008700 not classified & original description: pacid=50621984... 0.05 OrthoFinder output from all 47 species
Ceric.18G060200.1 Ceric.18G060200 not classified & original description: pacid=50621585... 0.06 OrthoFinder output from all 47 species
Ceric.1Z063900.1 CRR22, Ceric.1Z063900 not classified & original description: pacid=50615473... 0.05 OrthoFinder output from all 47 species
Ceric.20G063400.1 Ceric.20G063400 not classified & original description: pacid=50566354... 0.05 OrthoFinder output from all 47 species
Ceric.21G029400.1 Ceric.21G029400 not classified & original description: pacid=50602793... 0.06 OrthoFinder output from all 47 species
Ceric.22G014800.1 Ceric.22G014800 not classified & original description: pacid=50613770... 0.08 OrthoFinder output from all 47 species
Ceric.22G068300.1 Ceric.22G068300 not classified & original description: pacid=50614812... 0.05 OrthoFinder output from all 47 species
Ceric.22G068500.1 Ceric.22G068500 not classified & original description: pacid=50614116... 0.04 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.03 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.05 OrthoFinder output from all 47 species
Ceric.26G017800.1 Ceric.26G017800 not classified & original description: pacid=50599016... 0.05 OrthoFinder output from all 47 species
Ceric.26G057900.1 CRR22, Ceric.26G057900 not classified & original description: pacid=50598962... 0.06 OrthoFinder output from all 47 species
Ceric.27G064200.1 Ceric.27G064200 not classified & original description: pacid=50604994... 0.05 OrthoFinder output from all 47 species
Ceric.30G032300.1 Ceric.30G032300 not classified & original description: pacid=50608635... 0.06 OrthoFinder output from all 47 species
Ceric.35G003800.1 Ceric.35G003800 not classified & original description: pacid=50581275... 0.04 OrthoFinder output from all 47 species
Ceric.36G053200.1 CRR22, Ceric.36G053200 not classified & original description: pacid=50568627... 0.07 OrthoFinder output from all 47 species
Ceric.37G034100.1 Ceric.37G034100 not classified & original description: pacid=50616957... 0.05 OrthoFinder output from all 47 species
Ceric.38G032700.1 Ceric.38G032700 not classified & original description: pacid=50579462... 0.05 OrthoFinder output from all 47 species
Dac_g03359 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19052 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42862 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g44133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05661 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07150 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07656 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g07701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07738 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08400 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08886 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08911 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g08951 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16673 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17220 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17291 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36635 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36645 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38639 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40949 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40955 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50085 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os01g46230.1 MEF1, LOC_Os01g46230 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
LOC_Os03g41530.1 LOC_Os03g41530 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
LOC_Os07g20420.1 LOC_Os07g20420 Pentatricopeptide repeat-containing protein At3g26782,... 0.03 OrthoFinder output from all 47 species
LOC_Os11g37330.2 LOI1, MEF11,... RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
Len_g47516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_114565g0020 OTP84 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
MA_18383g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_36655g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Msp_g12042 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14968 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28101 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34024 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g40908 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48531 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15421 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g40748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36262 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43621 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13245 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g36011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo121365 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
Solyc01g102690.4.1 Solyc01g102690 Pentatricopeptide repeat-containing protein At3g49710... 0.04 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.05 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Spa_g09924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55548 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05566 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11929 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 731 755
IPR002885 Pentatricopeptide_repeat 258 283
IPR002885 Pentatricopeptide_repeat 157 182
IPR002885 Pentatricopeptide_repeat 495 515
IPR046848 E_motif 774 836
IPR002885 Pentatricopeptide_repeat 657 703
IPR002885 Pentatricopeptide_repeat 81 128
IPR002885 Pentatricopeptide_repeat 284 326
IPR002885 Pentatricopeptide_repeat 420 467
IPR002885 Pentatricopeptide_repeat 520 561
IPR002885 Pentatricopeptide_repeat 183 229
No external refs found!