Dcu_g45746


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g45746

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
AMTR_s00122p00115170 CRR21 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AT3G28660 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g009482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014913 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034377 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069023 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g095327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g114947 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06797 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07040 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18037 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18621 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18669 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19798 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26644 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26957 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30819 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57160 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012416 No alias not classified & original description: CDS=1-1722 0.03 OrthoFinder output from all 47 species
Cba_g04064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05567 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74968 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G042200.1 Ceric.02G042200 not classified & original description: pacid=50585785... 0.03 OrthoFinder output from all 47 species
Ceric.06G009700.1 VAC1, ECB2,... not classified & original description: pacid=50619980... 0.03 OrthoFinder output from all 47 species
Ceric.09G023800.1 Ceric.09G023800 not classified & original description: pacid=50587607... 0.03 OrthoFinder output from all 47 species
Ceric.11G085300.1 Ceric.11G085300 not classified & original description: pacid=50596385... 0.03 OrthoFinder output from all 47 species
Ceric.12G036800.1 Ceric.12G036800 not classified & original description: pacid=50601765... 0.03 OrthoFinder output from all 47 species
Ceric.14G093100.1 EMB2758, Ceric.14G093100 not classified & original description: pacid=50634261... 0.03 OrthoFinder output from all 47 species
Ceric.18G014200.1 VAC1, ECB2,... not classified & original description: pacid=50622305... 0.03 OrthoFinder output from all 47 species
Ceric.27G064300.1 Ceric.27G064300 not classified & original description: pacid=50606133... 0.03 OrthoFinder output from all 47 species
Ceric.30G057500.1 Ceric.30G057500 not classified & original description: pacid=50608517... 0.03 OrthoFinder output from all 47 species
Ceric.34G009600.1 Ceric.34G009600 not classified & original description: pacid=50623440... 0.03 OrthoFinder output from all 47 species
Ceric.35G003800.1 Ceric.35G003800 not classified & original description: pacid=50581275... 0.03 OrthoFinder output from all 47 species
Ceric.38G063600.1 Ceric.38G063600 not classified & original description: pacid=50580365... 0.03 OrthoFinder output from all 47 species
Dac_g05509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15109 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15344 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31750 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08698 EMB2744 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08773 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17104 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26715 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43186 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g45756 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45929 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50102 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16392 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01008965001 No alias Pentatricopeptide repeat-containing protein At4g18520,... 0.02 OrthoFinder output from all 47 species
GSVIVT01015466001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
GSVIVT01017365001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01023971001 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
GSVIVT01036142001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
GSVIVT01036207001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.03 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
LOC_Os05g12130.1 EMB2261, LOC_Os05g12130 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
LOC_Os05g50950.1 LOC_Os05g50950 Pentatricopeptide repeat-containing protein At4g01030,... 0.03 OrthoFinder output from all 47 species
LOC_Os07g02280.1 LOC_Os07g02280 RNA editing factor (OTP80) 0.04 OrthoFinder output from all 47 species
Len_g17570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g53944 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g36302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Msp_g25173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13299 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34092 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05872 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53964 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011812 OTP84 not classified & original description: CDS=1-1944 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024419 No alias not classified & original description: CDS=1-2448 0.03 OrthoFinder output from all 47 species
Sam_g11203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc01g097670.4.1 EMB2261, Solyc01g097670 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc04g005460.1.1 OTP82, Solyc04g005460 Pentatricopeptide repeat-containing protein At2g20540... 0.03 OrthoFinder output from all 47 species
Spa_g01728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14320 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17148 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26742 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007042_P001 Zm00001e007042 RNA editing factor (AEF1) 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.04 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.05 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.07 OrthoFinder output from all 47 species
Zm00001e034445_P001 LPA66, Zm00001e034445 Pentatricopeptide repeat-containing protein At5g48910... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 701 748
IPR002885 Pentatricopeptide_repeat 802 848
IPR002885 Pentatricopeptide_repeat 95 135
IPR002885 Pentatricopeptide_repeat 600 647
IPR002885 Pentatricopeptide_repeat 498 546
IPR002885 Pentatricopeptide_repeat 198 242
IPR002885 Pentatricopeptide_repeat 398 445
IPR002885 Pentatricopeptide_repeat 876 900
IPR002885 Pentatricopeptide_repeat 170 193
IPR002885 Pentatricopeptide_repeat 574 599
IPR002885 Pentatricopeptide_repeat 296 344
No external refs found!