Aliases : GRP2, ATGRP2, GR-RBP2
Description : RNA editing factor *(ORRM3) & original description: none
Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dcu_g45667 | |
Cluster | HCCA: Cluster_22 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G26420 | ATRZ-1A | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.04 | OrthoFinder output from all 47 species | |
AT4G13850 | GRP2, ATGRP2, GR-RBP2 | glycine-rich RNA-binding protein 2 | 0.02 | OrthoFinder output from all 47 species | |
AT5G04280 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.04 | OrthoFinder output from all 47 species | |
AT5G61030 | GR-RBP3 | glycine-rich RNA-binding protein 3 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g10906 | GRP2, ATGRP2, GR-RBP2 | RNA editing factor *(ORRM3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cre09.g392350 | GRP2, ATGRP2, GR-RBP2 | Glycine-rich RNA-binding protein 2, mitochondrial... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01016195001 | No alias | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033666001 | No alias | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
MA_10428777g0010 | CCR2, ATGRP7,... | Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g29443 | GR-RBP3 | RNA editing factor *(ORRM3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g10320 | GR-RBP3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g32515 | GR-RBP3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c4_6610V3.1 | GRP2, ATGRP2,... | glycine-rich RNA-binding protein 3 | 0.01 | OrthoFinder output from all 47 species | |
Sam_g38661 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g051377.1.1 | CCR2, ATGRP7,... | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g081180.2.1 | GR-RBP3, Solyc10g081180 | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g083240.2.1 | Solyc10g083240 | Small RNA-binding protein 11, chloroplastic... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e005260_P002 | Zm00001e005260 | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e012278_P001 | Zm00001e012278 | RNA chaperone (RZ1|GR-RBP) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e028481_P002 | GRP2, ATGRP2,... | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e033010_P001 | Zm00001e033010 | RNA chaperone (RZ1|GR-RBP) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 60 | 130 |
No external refs found! |