Dcu_g45125 (ATWBC11, ABCG11, DSO,...)

Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g45125

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00216p00024260	ATWBC11, ABCG11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AMTR_s01903p00008330	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s03052p00000290	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Ala_g25752	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aspi01Gene24079.t1	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Gb_00371	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Lfl_g38580	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Mp4g01480.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Msp_g18107	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Solyc01g105450.4.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR043926	ABCG_dom	314	370
IPR003439	ABC_transporter-like_ATP-bd	135	285
IPR013525	ABC_2_trans	439	511

External Links

No external refs found!