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  5. Dcu_g44606

Dcu_g44606


Description : meiotic crossover accessory E3 ubiquitin ligase *(HEI10/ZIP3) & original description: none


Gene families : OG0007798 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007798_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g44606
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Ceric.21G004400.1 Ceric.21G004400 meiotic crossover accessory E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01014096001 No alias Cell cycle.mitosis and meiosis.meiotic... 0.03 OrthoFinder output from all 47 species
Ppi_g13956 No alias meiotic crossover accessory E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Sam_g16090 No alias meiotic crossover accessory E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 2 42
No external refs found!