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  5. Dcu_g44577

Dcu_g44577


Description : not classified & original description: none


Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g44577

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00230510 evm_27.TU.AmTr_v1... DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G48650 No alias DEA(D/H)-box RNA helicase family protein 0.04 OrthoFinder output from all 47 species
AT1G58050 No alias RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Ala_g15870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g015912 No alias not classified & original description: CDS=1-2058 0.04 OrthoFinder output from all 47 species
Ceric.06G015600.1 Ceric.06G015600 not classified & original description: pacid=50620151... 0.03 OrthoFinder output from all 47 species
Dac_g08746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008365001 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08623 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_40990 No alias DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g19148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10437209g0010 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g36064 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10298 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo419303 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Smo437743 No alias DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc03g118920.3.1 Solyc03g118920 DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g007510.4.1 Solyc04g007510 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... 0.03 OrthoFinder output from all 47 species
Spa_g47720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 742 815
IPR011709 DEAD-box_helicase_OB_fold 901 979
IPR001650 Helicase_C 549 678
IPR014720 dsRBD_dom 1075 1137
IPR011545 DEAD/DEAH_box_helicase_dom 292 441
No external refs found!