Zm00001d053859 (GRMZM2G052720)


Aliases : GRMZM2G052720

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d053859
Cluster HCCA cluster: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.03 Gene family
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G19210 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.06 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.03 Gene family
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.06 Gene family
AT1G74930 ORA47 Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G40340 AtERF48, DREB2C Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G15210 ATERF4, RAP2.5,... ethylene responsive element binding factor 4 0.05 Gene family
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.02 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.02 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.02 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.04 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.07 Gene family
AT4G34410 RRTF1 redox responsive transcription factor 1 0.05 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT5G13330 Rap2.6L related to AP2 6l 0.03 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT5G61600 ERF104 ethylene response factor 104 0.04 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
AT5G67190 DEAR2 DREB and EAR motif protein 2 0.03 Gene family
GSVIVT01001089001 No alias No description available 0.02 Gene family
GSVIVT01008649001 No alias No description available 0.03 Gene family
GSVIVT01009007001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01013903001 No alias No description available 0.03 Gene family
GSVIVT01013905001 No alias No description available 0.04 Gene family
GSVIVT01013913001 No alias No description available 0.05 Gene family
GSVIVT01013916001 No alias No description available 0.05 Gene family
GSVIVT01013917001 No alias No description available 0.04 Gene family
GSVIVT01013918001 No alias No description available 0.05 Gene family
GSVIVT01013923001 No alias No description available 0.03 Gene family
GSVIVT01013929001 No alias No description available 0.02 Gene family
GSVIVT01013935001 No alias No description available 0.04 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01020584001 No alias No description available 0.06 Gene family
GSVIVT01021098001 No alias No description available 0.06 Gene family
GSVIVT01021146001 No alias No description available 0.03 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
GSVIVT01035852001 No alias No description available 0.01 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.02 Gene family
LOC_Os01g64790 Os01g0868000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.02 Gene family
LOC_Os02g06330 No alias No description available 0.02 Gene family
LOC_Os02g09650 Os02g0189500 No description available 0.04 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.05 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.04 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.04 Gene family
LOC_Os03g22170 Os03g0341000 No description available 0.02 Gene family
LOC_Os04g32790 Os04g0399800 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os04g46440 Os04g0550200 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.07 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.07 Gene family
LOC_Os05g25260 Os05g0316800 No description available 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.06 Gene family
LOC_Os06g47590 Os06g0691100 No description available 0.04 Gene family
LOC_Os07g42510 Os07g0617000 No description available 0.03 Gene family
LOC_Os08g31580 Os08g0408500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.04 Gene family
LOC_Os09g39850 Os09g0572000 No description available 0.03 Gene family
LOC_Os10g41130 Os10g0560700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os10g41330 Os10g0562900 No description available 0.06 Gene family
MA_104230g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_3405g0010 No alias No description available 0.02 Gene family
MA_4182g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_446533g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_83118g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_8384767g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_9565296g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_9905g0010 No alias No description available 0.02 Gene family
MA_99821g0010 No alias No description available 0.02 Gene family
Smo68470 PACid_15414525 No description available 0.02 Gene family
Solyc01g090560.3.1 Solyc01g090560.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.02 Gene family
Solyc02g067020.1.1 Solyc02g067020.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc02g077370.1.1 Solyc02g077370.1 No description available 0.05 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.02 Gene family
Solyc03g005500.1.1 Solyc03g005500.1 No description available 0.03 Gene family
Solyc03g005510.2.1 Solyc03g005510.2 No description available 0.02 Gene family
Solyc03g005520.1.1 Solyc03g005520.1 No description available 0.04 Gene family
Solyc03g093550.1.1 Solyc03g093550.1 No description available 0.04 Gene family
Solyc03g093560.1.1 Solyc03g093560.1 No description available 0.03 Gene family
Solyc03g093610.1.1 Solyc03g093610.1 No description available 0.03 Gene family
Solyc04g051360.3.1 Solyc04g051360.3 No description available 0.02 Gene family
Solyc04g054910.3.1 Solyc04g054910.3 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc04g071770.3.1 Solyc04g071770.3 No description available 0.06 Gene family
Solyc04g072900.1.1 Solyc04g072900.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc05g052030.1.1 Solyc05g052030.1 No description available 0.03 Gene family
Solyc05g052050.1.1 Solyc05g052050.1 No description available 0.02 Gene family
Solyc06g050520.2.1 Solyc06g050520.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc06g065820.3.1 Solyc06g065820.3 No description available 0.03 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.05 Gene family
Solyc07g053740.1.1 Solyc07g053740.1 No description available 0.05 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.05 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.03 Gene family
Solyc08g078190.1.1 Solyc08g078190.1 No description available 0.05 Gene family
Solyc09g066360.1.1 Solyc09g066360.1 No description available 0.02 Gene family
Solyc09g075420.3.1 Solyc09g075420.3 No description available 0.04 Gene family
Solyc09g089910.1.1 Solyc09g089910.1 No description available 0.02 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.04 Gene family
Solyc10g006130.1.1 Solyc10g006130.1 No description available 0.06 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.05 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.02 Gene family
Solyc10g076380.2.1 Solyc10g076380.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc11g012980.1.1 Solyc11g012980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc11g045680.2.1 Solyc11g045680.2 No description available 0.02 Gene family
Solyc12g008350.2.1 Solyc12g008350.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.02 Gene family
Solyc12g056590.2.1 Solyc12g056590.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d000179 GRMZM5G889719 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.03 Gene family
Zm00001d002744 GRMZM2G172936 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.02 Gene family
Zm00001d002762 GRMZM2G055180 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d005309 No alias No description available 0.03 Gene family
Zm00001d009573 GRMZM2G021790 No description available 0.02 Gene family
Zm00001d014113 GRMZM2G024871 17.5.3 hormone... 0.04 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.03 Gene family
Zm00001d020267 GRMZM2G141679 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d026182 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.04 Gene family
Zm00001d027686 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d027924 GRMZM2G129674 No description available 0.03 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.03 Gene family
Zm00001d030631 No alias 33.99 development.unspecified EMBRYO DEFECTIVE 2762 (EMB2762) 0.03 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.03 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d039077 GRMZM5G846057 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d039324 GRMZM2G142179 No description available 0.03 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.02 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d045120 GRMZM2G156006 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d046292 GRMZM2G073047 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d048297 GRMZM2G399098 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d049058 GRMZM2G073258,... No description available 0.03 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d051239 GRMZM2G300924 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 23 72
No external refs found!