1. Home
  2. Species
  3. Dicranopteris curranii
  4. Sequence
  5. Dcu_g43230

Dcu_g43230 (RHM1, ROL1, ATRHM1)


Aliases : RHM1, ROL1, ATRHM1

Description : UDP-L-rhamnose synthase *(RHM) & original description: none


Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g43230
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G78570 RHM1, ROL1, ATRHM1 rhamnose biosynthesis 1 0.05 OrthoFinder output from all 47 species
Aob_g01244 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G004900.1 ATRHM2, RHM2,... UDP-L-rhamnose synthase *(RHM) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g16757 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_18288 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase 0.04 OrthoFinder output from all 47 species
Len_g15700 NRS/ER, UER1 dTDP-rhamnose synthase *(NRS-ER) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30896 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50767 No alias UDP-L-rhamnose synthase *(RHM) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g05877 RHM1, ROL1, ATRHM1 UDP-L-rhamnose synthase *(RHM) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025412_P001 ATRHM2, RHM2,... Trifunctional UDP-glucose... 0.03 OrthoFinder output from all 47 species
Zm00001e038472_P001 RHM1, ROL1,... UDP-L-rhamnose synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 13 318
No external refs found!