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  5. Dcu_g42960

Dcu_g42960


Description : bHLH-type transcription factor & original description: none


Gene families : OG0005877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005877_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g42960
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
AT1G06170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.12 OrthoFinder output from all 47 species
AT2G31220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
Aop_g69486 No alias bHLH-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.14G094900.1 Ceric.14G094900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G089700.1 Ceric.21G089700 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01011330001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
LOC_Os01g18870.1 LOC_Os01g18870 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Len_g59537 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_1220g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Nbi_g30559 No alias bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g41320 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43808 No alias bHLH-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g16733 No alias bHLH-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Smo81013 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Solyc01g081100.3.1 Solyc01g081100 transcription factor (bHLH) 0.08 OrthoFinder output from all 47 species
Spa_g43678 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015546_P001 Zm00001e015546 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e025435_P001 Zm00001e025435 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 314 360
No external refs found!