Pp3c20_18970V3.1


Description : ribosomal protein 5B


Gene families : OG_01_0002222 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002222_tree ,
OG_02_0002391 (LandPlants) Phylogenetic Tree(s): OG_02_0002391_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c20_18970V3.1
Cluster HCCA: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00119380 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
AMTR_s00090p00050460 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
AT2G37270 RPS5B, ATRPS5B ribosomal protein 5B 0.32 Archaeplastida
AT3G11940 AML1, RPS5A, ATRPS5A ribosomal protein 5A 0.21 Archaeplastida
Cpa|evm.model.tig00021332.10 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.24 Archaeplastida
Cre06.g290950 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
GSVIVT01026328001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.21 Archaeplastida
GSVIVT01033419001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.23 Archaeplastida
Gb_04954 No alias component RPS5 of SSU proteome 0.08 Archaeplastida
Gb_10560 No alias component RPS5 of SSU proteome 0.03 Archaeplastida
Gb_10561 No alias component RPS5 of SSU proteome 0.04 Archaeplastida
LOC_Os01g01060.1 No alias component RPS5 of SSU proteome 0.14 Archaeplastida
LOC_Os11g29190.1 No alias component RPS5 of SSU proteome 0.09 Archaeplastida
MA_10428487g0010 No alias component RPS5 of SSU proteome 0.15 Archaeplastida
Mp3g10570.1 No alias component RPS5 of SSU proteome 0.21 Archaeplastida
Smo164593 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
Smo271466 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
Solyc10g078620.1.1 No alias component RPS5 of SSU proteome 0.17 Archaeplastida
Solyc11g042610.2.1 No alias component RPS5 of SSU proteome 0.23 Archaeplastida
Zm00001e025608_P002 No alias component RPS5 of SSU proteome 0.24 Archaeplastida
Zm00001e031425_P002 No alias component RPS5 of SSU proteome 0.22 Archaeplastida
AMTR_s00068p00119380 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 LandPlants
AMTR_s00090p00050460 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 LandPlants
AT2G37270 RPS5B, ATRPS5B ribosomal protein 5B 0.3 LandPlants
AT3G11940 AML1, RPS5A, ATRPS5A ribosomal protein 5A 0.19 LandPlants
GSVIVT01026328001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 LandPlants
GSVIVT01033419001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.2 LandPlants
Gb_10560 No alias component RPS5 of SSU proteome 0.02 LandPlants
Gb_10561 No alias component RPS5 of SSU proteome 0.04 LandPlants
LOC_Os01g01060.1 No alias component RPS5 of SSU proteome 0.14 LandPlants
LOC_Os11g29190.1 No alias component RPS5 of SSU proteome 0.09 LandPlants
MA_10428487g0010 No alias component RPS5 of SSU proteome 0.12 LandPlants
Mp3g10570.1 No alias component RPS5 of SSU proteome 0.19 LandPlants
Smo164593 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 LandPlants
Smo271466 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 LandPlants
Solyc10g078620.1.1 No alias component RPS5 of SSU proteome 0.15 LandPlants
Solyc11g042610.2.1 No alias component RPS5 of SSU proteome 0.21 LandPlants
Zm00001e025608_P002 No alias component RPS5 of SSU proteome 0.19 LandPlants
Zm00001e031425_P002 No alias component RPS5 of SSU proteome 0.18 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 51 196
No external refs found!