Dcu_g42345


Description : not classified & original description: none


Gene families : OG0005834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005834_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g42345
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00118590 evm_27.TU.AmTr_v1... Probable plastid-lipid-associated protein 4,... 0.06 OrthoFinder output from all 47 species
Adi_g041304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10400 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g15037 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g04164 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g00944 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g22462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0245.g059935 No alias not classified & original description: CDS=43-876 0.06 OrthoFinder output from all 47 species
Ceric.28G040000.1 Ceric.28G040000 not classified & original description: pacid=50570971... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020603.30 No alias Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021719.12 FIB4 No description available 0.02 OrthoFinder output from all 47 species
Cre03.g188650 No alias Probable plastid-lipid-associated protein 4,... 0.01 OrthoFinder output from all 47 species
Ehy_g17659 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01022995001 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g49720.1 LOC_Os03g49720 Probable plastid-lipid-associated protein 4,... 0.06 OrthoFinder output from all 47 species
Len_g48766 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g00639 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10435383g0010 No alias Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
Mp1g00160.1 No alias Probable plastid-lipid-associated protein 4,... 0.01 OrthoFinder output from all 47 species
Nbi_g02685 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g01288 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g35789 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g13948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52172 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Sam_g06190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06191 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo85410 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
Solyc11g044530.2.1 Solyc11g044530 Probable plastid-lipid-associated protein 4,... 0.05 OrthoFinder output from all 47 species
Tin_g11906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005397_P001 Zm00001e005397 Probable plastid-lipid-associated protein 4,... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 115 262
No external refs found!