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  5. Dcu_g42046

Dcu_g42046 (RCA)


Aliases : RCA

Description : ATP-dependent activase involved in RuBisCo regulation & original description: none


Gene families : OG0001509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g42046
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00255830 RCA,... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
AT2G39730 RCA rubisco activase 0.06 OrthoFinder output from all 47 species
Adi_g007841 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.12 OrthoFinder output from all 47 species
Adi_g056176 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.04 OrthoFinder output from all 47 species
Adi_g060599 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.04 OrthoFinder output from all 47 species
Adi_g079810 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Aev_g12706 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Aev_g40934 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.13 OrthoFinder output from all 47 species
Aob_g26956 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene46212.t1 RCA, Aspi01Gene46212 ATP-dependent activase involved in RuBisCo regulation &... 0.08 OrthoFinder output from all 47 species
Aspi01Gene66678.t1 RCA, Aspi01Gene66678 ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Cba_g02574 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Cba_g15232 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.07 OrthoFinder output from all 47 species
Ceric.28G002100.1 RCA, Ceric.28G002100 ATP-dependent activase involved in RuBisCo regulation &... 0.04 OrthoFinder output from all 47 species
Dde_g08345 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.13 OrthoFinder output from all 47 species
Dde_g18636 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.09 OrthoFinder output from all 47 species
Mp3g03990.1 RCA ATP-dependent activase involved in RuBisCo regulation 0.27 OrthoFinder output from all 47 species
Msp_g06782 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.04 OrthoFinder output from all 47 species
Msp_g10333 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Ore_g25744 RCA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08208 RCA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g23735 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.1 OrthoFinder output from all 47 species
Pir_g41355 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.11 OrthoFinder output from all 47 species
Pnu_g24705 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.07 OrthoFinder output from all 47 species
Ppi_g15847 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.04 OrthoFinder output from all 47 species
Ppi_g24643 RCA not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g086580.2.1 RCA, Solyc10g086580 ATP-dependent activase involved in RuBisCo regulation 0.07 OrthoFinder output from all 47 species
Spa_g05667 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.04 OrthoFinder output from all 47 species
Spa_g05668 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.05 OrthoFinder output from all 47 species
Spa_g29802 RCA ATP-dependent activase involved in RuBisCo regulation &... 0.03 OrthoFinder output from all 47 species
Zm00001e020928_P001 RCA, Zm00001e020928 ATP-dependent activase involved in RuBisCo regulation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 163 304
No external refs found!